Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav7-1A0A0G2JEV5 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.65□□□□□ -0.55
Trav7-1A0A0G2JEV5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7-1A0A0G2JEV5 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Trav7-1A0A0G2JEV5 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7-1A0A0G2JEV5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Trav7-1A0A0G2JEV5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7-1A0A0G2JEV5 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.65□□□□□ -0.55
Trav7-1A0A0G2JEV5 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7-1A0A0G2JEV5 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7-1A0A0G2JEV5 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7-1A0A0G2JEV5 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Gm27742-201ENSMUST00000184667 60 ntBASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-1A0A0G2JEV5 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-1A0A0G2JEV5 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms