Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Celf4-206ENSMUST00000224553 1729 ntBASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.77□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.77□□□□□ -0.52
Trbv13-3A0A0B4J1H2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm21814-202ENSMUST00000203277 873 ntBASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms