Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm13312-201ENSMUST00000119631 718 ntBASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm22697-201ENSMUST00000175194 63 ntBASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav6d-5A0A075B6B9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6d-5A0A075B6B9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6d-5A0A075B6B9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6d-5A0A075B6B9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6d-5A0A075B6B9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Trav6d-5A0A075B6B9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6d-5A0A075B6B9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6d-5A0A075B6B9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6d-5A0A075B6B9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav6d-5A0A075B6B9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms