Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm7367-201ENSMUST00000057611 492 ntBASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6n-6A0A075B6B2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm7284-201ENSMUST00000131667 944 ntBASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6n-6A0A075B6B2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Trav6n-6A0A075B6B2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms