Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav18A0A075B656 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.41□□□□□ -0.42
Trav18A0A075B656 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.41□□□□□ -0.42
Trav18A0A075B656 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.4□□□□□ -0.42
Trav18A0A075B656 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav18A0A075B656 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.4□□□□□ -0.42
Trav18A0A075B656 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Trav18A0A075B656 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.4□□□□□ -0.43
Trav18A0A075B656 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav18A0A075B656 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Gm14859-201ENSMUST00000117752 357 ntBASIC12.39□□□□□ -0.43
Trav18A0A075B656 Gm12644-201ENSMUST00000119935 606 ntBASIC12.39□□□□□ -0.43
Trav18A0A075B656 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Gm8318-201ENSMUST00000182954 872 ntBASIC12.39□□□□□ -0.43
Trav18A0A075B656 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav18A0A075B656 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav18A0A075B656 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms