Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Gm36967-201ENSMUST00000193814 266 ntBASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Gm2559-201ENSMUST00000201323 363 ntBASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Trav3-4A0A075B654 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Trav3-4A0A075B654 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Gm12620-201ENSMUST00000119791 1986 ntBASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Gm12612-201ENSMUST00000140182 1986 ntBASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Gm2011-201ENSMUST00000203124 1263 ntBASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Gm10033-202ENSMUST00000211874 928 ntBASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav3-4A0A075B654 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms