Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm29518-201ENSMUST00000190858 372 ntBASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav6-1A0A075B5Z8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6-1A0A075B5Z8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6-1A0A075B5Z8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6-1A0A075B5Z8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6-1A0A075B5Z8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6-1A0A075B5Z8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6-1A0A075B5Z8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-1A0A075B5Z8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm15165-201ENSMUST00000118140 502 ntBASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms