Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ClcnkaQ9WUB7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Gm7230-201ENSMUST00000173026 815 ntBASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Gm27741-201ENSMUST00000185060 237 ntBASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClcnkaQ9WUB7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ClcnkaQ9WUB7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ClcnkaQ9WUB7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.96□□□□□ -0.18
ClcnkaQ9WUB7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.96□□□□□ -0.18
ClcnkaQ9WUB7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ClcnkaQ9WUB7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ClcnkaQ9WUB7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
ClcnkaQ9WUB7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ClcnkaQ9WUB7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
ClcnkaQ9WUB7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
ClcnkaQ9WUB7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ClcnkaQ9WUB7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ClcnkaQ9WUB7 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Gm7222-201ENSMUST00000117512 906 ntBASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClcnkaQ9WUB7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ClcnkaQ9WUB7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms