Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.81□□□□□ -0.52
CcsQ9WU84 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
CcsQ9WU84 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.8□□□□□ -0.52
CcsQ9WU84 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.8□□□□□ -0.52
CcsQ9WU84 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CcsQ9WU84 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.8□□□□□ -0.52
CcsQ9WU84 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.8□□□□□ -0.52
CcsQ9WU84 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.8□□□□□ -0.52
CcsQ9WU84 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.8□□□□□ -0.52
CcsQ9WU84 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CcsQ9WU84 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.8□□□□□ -0.52
CcsQ9WU84 Gm21362-201ENSMUST00000194272 928 ntBASIC11.8□□□□□ -0.52
CcsQ9WU84 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
CcsQ9WU84 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Gm10566-201ENSMUST00000086739 996 ntBASIC11.8□□□□□ -0.52
CcsQ9WU84 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.8□□□□□ -0.52
CcsQ9WU84 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CcsQ9WU84 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcsQ9WU84 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
CcsQ9WU84 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.79□□□□□ -0.52
CcsQ9WU84 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
CcsQ9WU84 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
CcsQ9WU84 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CcsQ9WU84 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.79□□□□□ -0.52
CcsQ9WU84 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC11.79□□□□□ -0.52
CcsQ9WU84 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CcsQ9WU84 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CcsQ9WU84 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CcsQ9WU84 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CcsQ9WU84 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms