Protein–RNA interactions for Protein: Q9R1A9

Trex2, Three prime repair exonuclease 2, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex2Q9R1A9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trex2Q9R1A9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trex2Q9R1A9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trex2Q9R1A9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trex2Q9R1A9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trex2Q9R1A9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trex2Q9R1A9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trex2Q9R1A9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trex2Q9R1A9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trex2Q9R1A9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trex2Q9R1A9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trex2Q9R1A9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.79□□□□□ -0.36
Trex2Q9R1A9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trex2Q9R1A9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trex2Q9R1A9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trex2Q9R1A9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trex2Q9R1A9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.77□□□□□ -0.36
Trex2Q9R1A9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trex2Q9R1A9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.77□□□□□ -0.37
Trex2Q9R1A9 Gm8097-201ENSMUST00000117903 829 ntBASIC12.77□□□□□ -0.37
Trex2Q9R1A9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trex2Q9R1A9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.77□□□□□ -0.37
Trex2Q9R1A9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.77□□□□□ -0.37
Trex2Q9R1A9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trex2Q9R1A9 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.77□□□□□ -0.37
Trex2Q9R1A9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trex2Q9R1A9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trex2Q9R1A9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Trex2Q9R1A9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trex2Q9R1A9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trex2Q9R1A9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trex2Q9R1A9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trex2Q9R1A9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trex2Q9R1A9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trex2Q9R1A9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trex2Q9R1A9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trex2Q9R1A9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Gm34391-201ENSMUST00000203706 907 ntBASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Gm8655-201ENSMUST00000221159 852 ntBASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trex2Q9R1A9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms