Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RpgrQ9R0X5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RpgrQ9R0X5 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RpgrQ9R0X5 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RpgrQ9R0X5 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RpgrQ9R0X5 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RpgrQ9R0X5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RpgrQ9R0X5 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
RpgrQ9R0X5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Gm17971-201ENSMUST00000190239 806 ntBASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RpgrQ9R0X5 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Gm4459-201ENSMUST00000118750 468 ntBASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RpgrQ9R0X5 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
RpgrQ9R0X5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Gm27459-201ENSMUST00000184860 107 ntBASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RpgrQ9R0X5 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms