Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Gm4899-201ENSMUST00000178708 719 ntBASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Mir6956-201ENSMUST00000183598 62 ntBASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Gm27301-201ENSMUST00000184012 127 ntBASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom3Q9QXN0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Gm44492-201ENSMUST00000197012 141 ntBASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Efs-202ENSMUST00000227037 2540 ntBASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Celf4-206ENSMUST00000224553 1729 ntBASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom3Q9QXN0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms