Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a2Q9JLR1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a2Q9JLR1 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a2Q9JLR1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a2Q9JLR1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a2Q9JLR1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Sec61a2Q9JLR1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.66□□□□□ -0.22
Sec61a2Q9JLR1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.66□□□□□ -0.22
Sec61a2Q9JLR1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a2Q9JLR1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Sec61a2Q9JLR1 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a2Q9JLR1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Gm6376-201ENSMUST00000209407 580 ntBASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sec61a2Q9JLR1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Sec61a2Q9JLR1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Gm13418-201ENSMUST00000119097 944 ntBASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Rps4l-201ENSMUST00000071745 943 ntBASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sec61a2Q9JLR1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms