Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Gm8344-201ENSMUST00000119813 856 ntBASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Gm12497-201ENSMUST00000138778 237 ntBASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Gm27357-201ENSMUST00000183754 135 ntBASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl28Q9JIL2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl28Q9JIL2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl28Q9JIL2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl28Q9JIL2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Ccl28Q9JIL2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl28Q9JIL2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl28Q9JIL2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl28Q9JIL2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl28Q9JIL2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl28Q9JIL2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl28Q9JIL2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccl28Q9JIL2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl28Q9JIL2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl28Q9JIL2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.23□□□□□ -0.45
Ccl28Q9JIL2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl28Q9JIL2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Ccl28Q9JIL2 Gm17807-201ENSMUST00000186869 298 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms