Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.58□□□□□ -0.07
Ube4bQ9ES00 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.58□□□□□ -0.07
Ube4bQ9ES00 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.58□□□□□ -0.07
Ube4bQ9ES00 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ube4bQ9ES00 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Ube4bQ9ES00 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ube4bQ9ES00 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ube4bQ9ES00 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ube4bQ9ES00 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Gm7370-201ENSMUST00000219471 767 ntBASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ube4bQ9ES00 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Gm13436-201ENSMUST00000120418 567 ntBASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube4bQ9ES00 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.56□□□□□ -0.08
Ube4bQ9ES00 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube4bQ9ES00 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms