Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm44364-201ENSMUST00000198368 141 ntBASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Gm19309-201ENSMUST00000218295 205 ntBASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Upf1Q9EPU0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17■□□□□ 0.31
Upf1Q9EPU0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17■□□□□ 0.31
Upf1Q9EPU0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Upf1Q9EPU0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17■□□□□ 0.31
Upf1Q9EPU0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17■□□□□ 0.31
Upf1Q9EPU0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Upf1Q9EPU0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Upf1Q9EPU0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17■□□□□ 0.31
Upf1Q9EPU0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upf1Q9EPU0 Gm42442-201ENSMUST00000197951 1133 ntBASIC17■□□□□ 0.31
Upf1Q9EPU0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upf1Q9EPU0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Upf1Q9EPU0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upf1Q9EPU0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Gm13342-201ENSMUST00000121055 207 ntBASIC16.99■□□□□ 0.31
Upf1Q9EPU0 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Gm9182-201ENSMUST00000217829 639 ntBASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.99■□□□□ 0.31
Upf1Q9EPU0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.98■□□□□ 0.31
Upf1Q9EPU0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Gm19184-201ENSMUST00000196798 928 ntBASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Gm43758-201ENSMUST00000199500 367 ntBASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Mir125a-201ENSMUST00000083545 68 ntBASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Gm43289-201ENSMUST00000200537 1475 ntBASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upf1Q9EPU0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms