Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp1bQ9EPL6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp1bQ9EPL6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp1bQ9EPL6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp1bQ9EPL6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Mmp1bQ9EPL6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms