Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.8□□□□□ -0.04
Rrp8Q9DB85 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.8□□□□□ -0.04
Rrp8Q9DB85 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Gm12151-201ENSMUST00000121374 290 ntBASIC14.79□□□□□ -0.04
Rrp8Q9DB85 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Gm5866-201ENSMUST00000177881 973 ntBASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Gm5745-201ENSMUST00000183748 313 ntBASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rrp8Q9DB85 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Gm27618-201ENSMUST00000183671 60 ntBASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Mir8102-201ENSMUST00000184148 139 ntBASIC14.78□□□□□ -0.04
Rrp8Q9DB85 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rrp8Q9DB85 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rrp8Q9DB85 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rrp8Q9DB85 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.77□□□□□ -0.04
Rrp8Q9DB85 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rrp8Q9DB85 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rrp8Q9DB85 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Rrp8Q9DB85 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.77□□□□□ -0.05
Rrp8Q9DB85 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rrp8Q9DB85 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rrp8Q9DB85 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.77□□□□□ -0.05
Rrp8Q9DB85 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rrp8Q9DB85 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Rrp8Q9DB85 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rrp8Q9DB85 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Rrp8Q9DB85 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms