Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rsph3bQ9DA80 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rsph3bQ9DA80 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Gm9385-201ENSMUST00000117563 472 ntBASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Gm16198-201ENSMUST00000118766 670 ntBASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Gm11745-201ENSMUST00000121669 448 ntBASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Gm8396-201ENSMUST00000057361 823 ntBASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Rsph3bQ9DA80 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rsph3bQ9DA80 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rsph3bQ9DA80 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rsph3bQ9DA80 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rsph3bQ9DA80 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rsph3bQ9DA80 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rsph3bQ9DA80 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rsph3bQ9DA80 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 Gm13365-201ENSMUST00000121188 973 ntBASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 Gm10154-201ENSMUST00000084445 354 ntBASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rsph3bQ9DA80 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Gm2272-201ENSMUST00000194903 582 ntBASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Gm44335-201ENSMUST00000196879 141 ntBASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Gm44297-201ENSMUST00000198304 141 ntBASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Gm44346-201ENSMUST00000198851 141 ntBASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rsph3bQ9DA80 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rsph3bQ9DA80 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rsph3bQ9DA80 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rsph3bQ9DA80 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rsph3bQ9DA80 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rsph3bQ9DA80 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rsph3bQ9DA80 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rsph3bQ9DA80 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rsph3bQ9DA80 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rsph3bQ9DA80 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rsph3bQ9DA80 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Rsph3bQ9DA80 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.56■□□□□ 0.24
Rsph3bQ9DA80 Rprl2-201ENSMUST00000157150 290 ntBASIC16.56■□□□□ 0.24
Rsph3bQ9DA80 Rpph1-201ENSMUST00000175096 319 ntBASIC16.56■□□□□ 0.24
Rsph3bQ9DA80 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.56■□□□□ 0.24
Rsph3bQ9DA80 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.56■□□□□ 0.24
Rsph3bQ9DA80 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms