Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Chmp5Q9D7S9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Gm8344-201ENSMUST00000119813 856 ntBASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Gm25745-201ENSMUST00000174945 133 ntBASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp5Q9D7S9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Chmp5Q9D7S9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp5Q9D7S9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp5Q9D7S9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp5Q9D7S9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Chmp5Q9D7S9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp5Q9D7S9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp5Q9D7S9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.94■□□□□ 0.62
Chmp5Q9D7S9 Gm23634-201ENSMUST00000175071 91 ntBASIC18.94■□□□□ 0.62
Chmp5Q9D7S9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp5Q9D7S9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.94■□□□□ 0.62
Chmp5Q9D7S9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Chmp5Q9D7S9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp5Q9D7S9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp5Q9D7S9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp5Q9D7S9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp5Q9D7S9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Chmp5Q9D7S9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp5Q9D7S9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp5Q9D7S9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Gm27742-201ENSMUST00000184667 60 ntBASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp5Q9D7S9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms