Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap53Q9D439 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap53Q9D439 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Cfap53Q9D439 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.64■□□□□ 0.25
Cfap53Q9D439 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap53Q9D439 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap53Q9D439 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap53Q9D439 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap53Q9D439 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap53Q9D439 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cfap53Q9D439 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.64■□□□□ 0.25
Cfap53Q9D439 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap53Q9D439 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap53Q9D439 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap53Q9D439 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.64■□□□□ 0.25
Cfap53Q9D439 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Cfap53Q9D439 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap53Q9D439 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cfap53Q9D439 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap53Q9D439 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Cfap53Q9D439 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap53Q9D439 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap53Q9D439 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap53Q9D439 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Gm6550-201ENSMUST00000187574 993 ntBASIC16.63■□□□□ 0.25
Cfap53Q9D439 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.63■□□□□ 0.25
Cfap53Q9D439 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap53Q9D439 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cfap53Q9D439 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Cfap53Q9D439 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.62■□□□□ 0.25
Cfap53Q9D439 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cfap53Q9D439 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cfap53Q9D439 Gm10060-201ENSMUST00000212002 111 ntBASIC16.62■□□□□ 0.25
Cfap53Q9D439 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.62■□□□□ 0.25
Cfap53Q9D439 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cfap53Q9D439 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Cfap53Q9D439 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cfap53Q9D439 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cfap53Q9D439 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cfap53Q9D439 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cfap53Q9D439 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cfap53Q9D439 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap53Q9D439 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.61■□□□□ 0.25
Cfap53Q9D439 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Gm18195-201ENSMUST00000207604 706 ntBASIC16.61■□□□□ 0.25
Cfap53Q9D439 Gm7787-201ENSMUST00000216858 688 ntBASIC16.61■□□□□ 0.25
Cfap53Q9D439 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.61■□□□□ 0.25
Cfap53Q9D439 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap53Q9D439 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.6■□□□□ 0.25
Cfap53Q9D439 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms