Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC16.04■□□□□ 0.16
Lysmd1Q9D0E3 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Lysmd1Q9D0E3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd1Q9D0E3 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd1Q9D0E3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd1Q9D0E3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd1Q9D0E3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd1Q9D0E3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd1Q9D0E3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Lysmd1Q9D0E3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Lysmd1Q9D0E3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd1Q9D0E3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.04■□□□□ 0.16
Lysmd1Q9D0E3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC16.04■□□□□ 0.16
Lysmd1Q9D0E3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Gm12585-201ENSMUST00000117307 290 ntBASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Gm11628-201ENSMUST00000117568 171 ntBASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Gm14263-201ENSMUST00000117955 746 ntBASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Gm7287-201ENSMUST00000205267 602 ntBASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Gm5363-201ENSMUST00000211927 938 ntBASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd1Q9D0E3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 Gm12997-201ENSMUST00000120207 640 ntBASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 Gm2495-201ENSMUST00000191160 466 ntBASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 Gm38000-201ENSMUST00000192390 1215 ntBASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 Gm19184-201ENSMUST00000196798 928 ntBASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 Gm42442-201ENSMUST00000197951 1133 ntBASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Lysmd1Q9D0E3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lysmd1Q9D0E3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lysmd1Q9D0E3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lysmd1Q9D0E3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Lysmd1Q9D0E3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lysmd1Q9D0E3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lysmd1Q9D0E3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Gm5479-201ENSMUST00000160578 435 ntBASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Gm37986-201ENSMUST00000193285 383 ntBASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Gm5279-201ENSMUST00000199575 745 ntBASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Gm8463-201ENSMUST00000208573 613 ntBASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Gm7553-201ENSMUST00000185805 1426 ntBASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd1Q9D0E3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
Lysmd1Q9D0E3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms