Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hdhd3Q9CYW4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.33□□□□□ -0.43
Hdhd3Q9CYW4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Hdhd3Q9CYW4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Hdhd3Q9CYW4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Mir770-201ENSMUST00000103252 94 ntBASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Gm11355-201ENSMUST00000121120 306 ntBASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hdhd3Q9CYW4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms