Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm18032-201ENSMUST00000222541 538 ntBASIC14.02□□□□□ -0.17
Trim13Q9CYB0 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.02□□□□□ -0.17
Trim13Q9CYB0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim13Q9CYB0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim13Q9CYB0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim13Q9CYB0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim13Q9CYB0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim13Q9CYB0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim13Q9CYB0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim13Q9CYB0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim13Q9CYB0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim13Q9CYB0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Trim13Q9CYB0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim13Q9CYB0 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim13Q9CYB0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim13Q9CYB0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trim13Q9CYB0 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Efs-202ENSMUST00000227037 2540 ntBASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Mir770-201ENSMUST00000103252 94 ntBASIC14.01□□□□□ -0.17
Trim13Q9CYB0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.01□□□□□ -0.17
Trim13Q9CYB0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim13Q9CYB0 Gm5049-201ENSMUST00000195878 1590 ntBASIC14□□□□□ -0.17
Trim13Q9CYB0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim13Q9CYB0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14□□□□□ -0.17
Trim13Q9CYB0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim13Q9CYB0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim13Q9CYB0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Trim13Q9CYB0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Gm13337-201ENSMUST00000119183 1594 ntBASIC14□□□□□ -0.17
Trim13Q9CYB0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Trim13Q9CYB0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Trim13Q9CYB0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim13Q9CYB0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms