Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ssu72Q9CY97 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssu72Q9CY97 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ssu72Q9CY97 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssu72Q9CY97 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ssu72Q9CY97 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ssu72Q9CY97 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ssu72Q9CY97 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssu72Q9CY97 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ssu72Q9CY97 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ssu72Q9CY97 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ssu72Q9CY97 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssu72Q9CY97 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.03■□□□□ -0
Ssu72Q9CY97 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.03■□□□□ -0
Ssu72Q9CY97 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.03■□□□□ -0
Ssu72Q9CY97 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Gm15565-201ENSMUST00000118890 427 ntBASIC15.03■□□□□ -0
Ssu72Q9CY97 Gm15358-201ENSMUST00000119249 520 ntBASIC15.03■□□□□ -0
Ssu72Q9CY97 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.03■□□□□ -0
Ssu72Q9CY97 Gm12497-201ENSMUST00000138778 237 ntBASIC15.03■□□□□ -0
Ssu72Q9CY97 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Ssu72Q9CY97 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.03■□□□□ -0
Ssu72Q9CY97 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ssu72Q9CY97 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.03■□□□□ -0
Ssu72Q9CY97 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Ssu72Q9CY97 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ssu72Q9CY97 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.03■□□□□ -0
Ssu72Q9CY97 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ssu72Q9CY97 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ssu72Q9CY97 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.02■□□□□ -0
Ssu72Q9CY97 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Ssu72Q9CY97 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Ssu72Q9CY97 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ssu72Q9CY97 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ssu72Q9CY97 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ssu72Q9CY97 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ssu72Q9CY97 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ssu72Q9CY97 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ssu72Q9CY97 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ssu72Q9CY97 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ssu72Q9CY97 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ssu72Q9CY97 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.02■□□□□ -0
Ssu72Q9CY97 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ssu72Q9CY97 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.02■□□□□ -0
Ssu72Q9CY97 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Ssu72Q9CY97 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.02□□□□□ -0.01
Ssu72Q9CY97 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ssu72Q9CY97 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ssu72Q9CY97 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Ssu72Q9CY97 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ssu72Q9CY97 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ssu72Q9CY97 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Gm43767-201ENSMUST00000198933 381 ntBASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ssu72Q9CY97 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms