Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ssr1Q9CY50 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Gm9172-201ENSMUST00000212092 954 ntBASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ssr1Q9CY50 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Ssr1Q9CY50 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ssr1Q9CY50 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ssr1Q9CY50 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Gm15165-201ENSMUST00000118140 502 ntBASIC16.45■□□□□ 0.22
Ssr1Q9CY50 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.45■□□□□ 0.22
Ssr1Q9CY50 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Gm14859-201ENSMUST00000117752 357 ntBASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Gm33142-201ENSMUST00000193913 867 ntBASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.44■□□□□ 0.22
Ssr1Q9CY50 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms