Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cldnd1Q9CQX5 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Cldnd1Q9CQX5 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cldnd1Q9CQX5 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cldnd1Q9CQX5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Mir1897-201ENSMUST00000122581 272 ntBASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Gm18018-201ENSMUST00000198273 408 ntBASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Gm9908-201ENSMUST00000211534 448 ntBASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cldnd1Q9CQX5 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Gm4875-201ENSMUST00000118257 786 ntBASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Gm8602-201ENSMUST00000184045 607 ntBASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldnd1Q9CQX5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Gm14042-201ENSMUST00000120139 833 ntBASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Gm18062-201ENSMUST00000208020 547 ntBASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Gm18055-201ENSMUST00000208254 547 ntBASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Gm46209-201ENSMUST00000217912 553 ntBASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.4■□□□□ 0.06
Cldnd1Q9CQX5 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.06
Cldnd1Q9CQX5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Cldnd1Q9CQX5 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms