Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Gm12260-201ENSMUST00000122447 411 ntBASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Gm24513-201ENSMUST00000174964 138 ntBASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Gm27300-201ENSMUST00000184085 97 ntBASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Gm27335-201ENSMUST00000184758 97 ntBASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Gm43575-201ENSMUST00000196420 516 ntBASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.27■□□□□ 0.04
Retreg3Q9CQV4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retreg3Q9CQV4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retreg3Q9CQV4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.27■□□□□ 0.03
Retreg3Q9CQV4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Retreg3Q9CQV4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Retreg3Q9CQV4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Gm14140-201ENSMUST00000119999 995 ntBASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Gm27397-201ENSMUST00000184997 107 ntBASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Retreg3Q9CQV4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.25■□□□□ 0.03
Retreg3Q9CQV4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms