Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm7Q9CQQ8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm7Q9CQQ8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm7Q9CQQ8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm7Q9CQQ8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm7Q9CQQ8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm7Q9CQQ8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm7Q9CQQ8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Lsm7Q9CQQ8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm7Q9CQQ8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm7Q9CQQ8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm7Q9CQQ8 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.27■□□□□ 0.04
Lsm7Q9CQQ8 Gm45612-201ENSMUST00000211320 160 ntBASIC15.27■□□□□ 0.04
Lsm7Q9CQQ8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.27■□□□□ 0.04
Lsm7Q9CQQ8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.27■□□□□ 0.04
Lsm7Q9CQQ8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm7Q9CQQ8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm7Q9CQQ8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm7Q9CQQ8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm7Q9CQQ8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm7Q9CQQ8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm7Q9CQQ8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.27■□□□□ 0.03
Lsm7Q9CQQ8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm7Q9CQQ8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm7Q9CQQ8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm7Q9CQQ8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm7Q9CQQ8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Lsm7Q9CQQ8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm7Q9CQQ8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Lsm7Q9CQQ8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm7Q9CQQ8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 Rprl2-201ENSMUST00000157150 290 ntBASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm7Q9CQQ8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Lsm7Q9CQQ8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms