Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm33142-201ENSMUST00000193913 867 ntBASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.94□□□□□ -0.02
Nipsnap3bQ9CQE1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nipsnap3bQ9CQE1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm8097-201ENSMUST00000117903 829 ntBASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms