Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.24■□□□□ 0.19
Tlr3Q99MB1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Celf4-206ENSMUST00000224553 1729 ntBASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.24■□□□□ 0.19
Tlr3Q99MB1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tlr3Q99MB1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Gm14140-201ENSMUST00000119999 995 ntBASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tlr3Q99MB1 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Gm4899-201ENSMUST00000178708 719 ntBASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Gm27397-201ENSMUST00000184997 107 ntBASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
Tlr3Q99MB1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms