Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Gm11424-201ENSMUST00000121929 829 ntBASIC13.27□□□□□ -0.29
Scrt1Q99M85 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Gm43125-201ENSMUST00000201724 730 ntBASIC13.27□□□□□ -0.29
Scrt1Q99M85 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scrt1Q99M85 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scrt1Q99M85 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scrt1Q99M85 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.26□□□□□ -0.29
Scrt1Q99M85 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.26□□□□□ -0.29
Scrt1Q99M85 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.26□□□□□ -0.29
Scrt1Q99M85 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.26□□□□□ -0.29
Scrt1Q99M85 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scrt1Q99M85 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.25□□□□□ -0.29
Scrt1Q99M85 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.25□□□□□ -0.29
Scrt1Q99M85 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.25□□□□□ -0.29
Scrt1Q99M85 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Mir449b-201ENSMUST00000104833 80 ntBASIC13.25□□□□□ -0.29
Scrt1Q99M85 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Gm18489-201ENSMUST00000172565 551 ntBASIC13.25□□□□□ -0.29
Scrt1Q99M85 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.25□□□□□ -0.29
Scrt1Q99M85 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.25□□□□□ -0.29
Scrt1Q99M85 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.25□□□□□ -0.29
Scrt1Q99M85 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scrt1Q99M85 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms