Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RtcbQ99LF4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RtcbQ99LF4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RtcbQ99LF4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RtcbQ99LF4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RtcbQ99LF4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RtcbQ99LF4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.59■□□□□ 0.57
RtcbQ99LF4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.59■□□□□ 0.57
RtcbQ99LF4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RtcbQ99LF4 Ighv5-13-201ENSMUST00000193550 290 ntBASIC18.59■□□□□ 0.57
RtcbQ99LF4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RtcbQ99LF4 Gm25857-201ENSMUST00000082788 129 ntBASIC18.59■□□□□ 0.57
RtcbQ99LF4 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RtcbQ99LF4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RtcbQ99LF4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RtcbQ99LF4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RtcbQ99LF4 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RtcbQ99LF4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.59■□□□□ 0.57
RtcbQ99LF4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RtcbQ99LF4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RtcbQ99LF4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RtcbQ99LF4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.58■□□□□ 0.57
RtcbQ99LF4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RtcbQ99LF4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.58■□□□□ 0.57
RtcbQ99LF4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RtcbQ99LF4 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RtcbQ99LF4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RtcbQ99LF4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RtcbQ99LF4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RtcbQ99LF4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RtcbQ99LF4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RtcbQ99LF4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
RtcbQ99LF4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RtcbQ99LF4 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.58■□□□□ 0.57
RtcbQ99LF4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RtcbQ99LF4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RtcbQ99LF4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RtcbQ99LF4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RtcbQ99LF4 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
RtcbQ99LF4 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RtcbQ99LF4 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.58■□□□□ 0.56
RtcbQ99LF4 Gm45384-201ENSMUST00000210451 277 ntBASIC18.58■□□□□ 0.56
RtcbQ99LF4 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.58■□□□□ 0.56
RtcbQ99LF4 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RtcbQ99LF4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RtcbQ99LF4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RtcbQ99LF4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RtcbQ99LF4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RtcbQ99LF4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RtcbQ99LF4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RtcbQ99LF4 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RtcbQ99LF4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RtcbQ99LF4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RtcbQ99LF4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RtcbQ99LF4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RtcbQ99LF4 Gm4875-201ENSMUST00000118257 786 ntBASIC18.57■□□□□ 0.56
RtcbQ99LF4 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.57■□□□□ 0.56
RtcbQ99LF4 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.57■□□□□ 0.56
RtcbQ99LF4 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.57■□□□□ 0.56
RtcbQ99LF4 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.57■□□□□ 0.56
RtcbQ99LF4 Gm5479-201ENSMUST00000160578 435 ntBASIC18.57■□□□□ 0.56
RtcbQ99LF4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RtcbQ99LF4 Gm46209-201ENSMUST00000217912 553 ntBASIC18.57■□□□□ 0.56
RtcbQ99LF4 Gm20445-201ENSMUST00000061905 565 ntBASIC18.57■□□□□ 0.56
RtcbQ99LF4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RtcbQ99LF4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RtcbQ99LF4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RtcbQ99LF4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RtcbQ99LF4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RtcbQ99LF4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RtcbQ99LF4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RtcbQ99LF4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RtcbQ99LF4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RtcbQ99LF4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.57■□□□□ 0.56
RtcbQ99LF4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RtcbQ99LF4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RtcbQ99LF4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RtcbQ99LF4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.56■□□□□ 0.56
RtcbQ99LF4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RtcbQ99LF4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RtcbQ99LF4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.56■□□□□ 0.56
RtcbQ99LF4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RtcbQ99LF4 Gm6912-201ENSMUST00000117218 544 ntBASIC18.56■□□□□ 0.56
RtcbQ99LF4 Gm11478-201ENSMUST00000117851 599 ntBASIC18.56■□□□□ 0.56
RtcbQ99LF4 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RtcbQ99LF4 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RtcbQ99LF4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.56■□□□□ 0.56
RtcbQ99LF4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RtcbQ99LF4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RtcbQ99LF4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RtcbQ99LF4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RtcbQ99LF4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RtcbQ99LF4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RtcbQ99LF4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.55■□□□□ 0.56
RtcbQ99LF4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.55■□□□□ 0.56
RtcbQ99LF4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RtcbQ99LF4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms