Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lims1Q99JW4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lims1Q99JW4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.82□□□□□ -0.2
Lims1Q99JW4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.82□□□□□ -0.2
Lims1Q99JW4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Lims1Q99JW4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lims1Q99JW4 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lims1Q99JW4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lims1Q99JW4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lims1Q99JW4 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.81□□□□□ -0.2
Lims1Q99JW4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lims1Q99JW4 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lims1Q99JW4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Lims1Q99JW4 Gm12895-201ENSMUST00000122214 226 ntBASIC13.81□□□□□ -0.2
Lims1Q99JW4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.81□□□□□ -0.2
Lims1Q99JW4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.81□□□□□ -0.2
Lims1Q99JW4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lims1Q99JW4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lims1Q99JW4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lims1Q99JW4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lims1Q99JW4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lims1Q99JW4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lims1Q99JW4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Lims1Q99JW4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Lims1Q99JW4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Lims1Q99JW4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lims1Q99JW4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Gm8097-201ENSMUST00000117903 829 ntBASIC13.8□□□□□ -0.2
Lims1Q99JW4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lims1Q99JW4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lims1Q99JW4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Gm17971-201ENSMUST00000190239 806 ntBASIC13.79□□□□□ -0.2
Lims1Q99JW4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.79□□□□□ -0.2
Lims1Q99JW4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms