Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc4Q99J62 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.42■□□□□ 0.38
Rfc4Q99J62 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.42■□□□□ 0.38
Rfc4Q99J62 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc4Q99J62 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.42■□□□□ 0.38
Rfc4Q99J62 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc4Q99J62 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc4Q99J62 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Gm13453-201ENSMUST00000118708 357 ntBASIC17.41■□□□□ 0.38
Rfc4Q99J62 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc4Q99J62 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rfc4Q99J62 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc4Q99J62 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rfc4Q99J62 App-207ENSMUST00000227737 2827 ntBASIC17.4■□□□□ 0.38
Rfc4Q99J62 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc4Q99J62 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Rfc4Q99J62 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc4Q99J62 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.4■□□□□ 0.38
Rfc4Q99J62 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Rfc4Q99J62 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc4Q99J62 Gm38294-201ENSMUST00000192831 381 ntBASIC17.4■□□□□ 0.38
Rfc4Q99J62 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc4Q99J62 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc4Q99J62 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.4■□□□□ 0.38
Rfc4Q99J62 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc4Q99J62 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc4Q99J62 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Rfc4Q99J62 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Rfc4Q99J62 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.39■□□□□ 0.38
Rfc4Q99J62 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc4Q99J62 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rfc4Q99J62 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rfc4Q99J62 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.38■□□□□ 0.37
Rfc4Q99J62 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Mir7684-201ENSMUST00000183858 60 ntBASIC17.38■□□□□ 0.37
Rfc4Q99J62 Gm6888-201ENSMUST00000221983 706 ntBASIC17.38■□□□□ 0.37
Rfc4Q99J62 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.38■□□□□ 0.37
Rfc4Q99J62 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms