Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col20a1Q923P0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.83■□□□□ 0.45
Col20a1Q923P0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Col20a1Q923P0 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.83■□□□□ 0.45
Col20a1Q923P0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col20a1Q923P0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col20a1Q923P0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.45
Col20a1Q923P0 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.83■□□□□ 0.44
Col20a1Q923P0 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.83■□□□□ 0.44
Col20a1Q923P0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.83■□□□□ 0.44
Col20a1Q923P0 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.83■□□□□ 0.44
Col20a1Q923P0 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.83■□□□□ 0.44
Col20a1Q923P0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col20a1Q923P0 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.83■□□□□ 0.44
Col20a1Q923P0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col20a1Q923P0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col20a1Q923P0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col20a1Q923P0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col20a1Q923P0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col20a1Q923P0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.83■□□□□ 0.44
Col20a1Q923P0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col20a1Q923P0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col20a1Q923P0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col20a1Q923P0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Mir449b-201ENSMUST00000104833 80 ntBASIC17.82■□□□□ 0.44
Col20a1Q923P0 Gm2810-201ENSMUST00000118681 990 ntBASIC17.82■□□□□ 0.44
Col20a1Q923P0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col20a1Q923P0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Gm25948-201ENSMUST00000175334 112 ntBASIC17.82■□□□□ 0.44
Col20a1Q923P0 Gm10253-201ENSMUST00000194270 940 ntBASIC17.82■□□□□ 0.44
Col20a1Q923P0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Col20a1Q923P0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.81■□□□□ 0.44
Col20a1Q923P0 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.81■□□□□ 0.44
Col20a1Q923P0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col20a1Q923P0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.81■□□□□ 0.44
Col20a1Q923P0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col20a1Q923P0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Gm24158-201ENSMUST00000175263 71 ntBASIC17.8■□□□□ 0.44
Col20a1Q923P0 Gm7774-201ENSMUST00000200064 533 ntBASIC17.8■□□□□ 0.44
Col20a1Q923P0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col20a1Q923P0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms