Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3b3Q921M3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3b3Q921M3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3b3Q921M3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Sf3b3Q921M3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3b3Q921M3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Sf3b3Q921M3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3b3Q921M3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3b3Q921M3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sf3b3Q921M3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Gm14719-201ENSMUST00000121891 340 ntBASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Gm15487-201ENSMUST00000122373 465 ntBASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Gm44344-201ENSMUST00000200287 129 ntBASIC18.11■□□□□ 0.49
Sf3b3Q921M3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sf3b3Q921M3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3b3Q921M3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3b3Q921M3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Sf3b3Q921M3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3b3Q921M3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Sf3b3Q921M3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3b3Q921M3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Sf3b3Q921M3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3b3Q921M3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Sf3b3Q921M3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3b3Q921M3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3b3Q921M3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC18.1■□□□□ 0.49
Sf3b3Q921M3 Gm9719-201ENSMUST00000162765 543 ntBASIC18.1■□□□□ 0.49
Sf3b3Q921M3 H2-Pa-201ENSMUST00000182803 626 ntBASIC18.1■□□□□ 0.49
Sf3b3Q921M3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3b3Q921M3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3b3Q921M3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3b3Q921M3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3b3Q921M3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3b3Q921M3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Gm5745-201ENSMUST00000183748 313 ntBASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3b3Q921M3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sf3b3Q921M3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Sf3b3Q921M3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
Sf3b3Q921M3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sf3b3Q921M3 Gm24543-201ENSMUST00000103867 82 ntBASIC18.08■□□□□ 0.48
Sf3b3Q921M3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sf3b3Q921M3 Gm7730-201ENSMUST00000212486 454 ntBASIC18.08■□□□□ 0.48
Sf3b3Q921M3 AC132863.2-201ENSMUST00000226643 799 ntBASIC18.08■□□□□ 0.48
Sf3b3Q921M3 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.08■□□□□ 0.48
Sf3b3Q921M3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sf3b3Q921M3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sf3b3Q921M3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sf3b3Q921M3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sf3b3Q921M3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sf3b3Q921M3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms