Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.47■□□□□ 0.39
Smc1bQ920F6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1bQ920F6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1bQ920F6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.47■□□□□ 0.39
Smc1bQ920F6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1bQ920F6 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.47■□□□□ 0.39
Smc1bQ920F6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Smc1bQ920F6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1bQ920F6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1bQ920F6 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1bQ920F6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1bQ920F6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1bQ920F6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1bQ920F6 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.47■□□□□ 0.39
Smc1bQ920F6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.46■□□□□ 0.39
Smc1bQ920F6 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.46■□□□□ 0.39
Smc1bQ920F6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Smc1bQ920F6 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1bQ920F6 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1bQ920F6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.46■□□□□ 0.39
Smc1bQ920F6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.46■□□□□ 0.39
Smc1bQ920F6 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.46■□□□□ 0.39
Smc1bQ920F6 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.46■□□□□ 0.39
Smc1bQ920F6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.46■□□□□ 0.39
Smc1bQ920F6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Smc1bQ920F6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1bQ920F6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1bQ920F6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1bQ920F6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1bQ920F6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1bQ920F6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1bQ920F6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Smc1bQ920F6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.45■□□□□ 0.38
Smc1bQ920F6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.45■□□□□ 0.38
Smc1bQ920F6 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Gm27301-201ENSMUST00000184012 127 ntBASIC17.45■□□□□ 0.38
Smc1bQ920F6 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Smc1bQ920F6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Gm15358-201ENSMUST00000119249 520 ntBASIC17.44■□□□□ 0.38
Smc1bQ920F6 Gm9682-201ENSMUST00000197505 556 ntBASIC17.44■□□□□ 0.38
Smc1bQ920F6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.44■□□□□ 0.38
Smc1bQ920F6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1bQ920F6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1bQ920F6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1bQ920F6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1bQ920F6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1bQ920F6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Smc1bQ920F6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1bQ920F6 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1bQ920F6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1bQ920F6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1bQ920F6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1bQ920F6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms