Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha11Q91Y19 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha11Q91Y19 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Gm24513-201ENSMUST00000174964 138 ntBASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Gm27702-201ENSMUST00000184512 56 ntBASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Gm45747-201ENSMUST00000212203 999 ntBASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha11Q91Y19 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Gm27301-201ENSMUST00000184012 127 ntBASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Gm2756-201ENSMUST00000195851 400 ntBASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Gm5867-201ENSMUST00000063197 592 ntBASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha11Q91Y19 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Gm6736-201ENSMUST00000166583 948 ntBASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha11Q91Y19 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 109.8 ms