Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 AW822252-206ENSMUST00000208904 237 ntBASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Gm5364-201ENSMUST00000216789 889 ntBASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha3Q91Y16 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha3Q91Y16 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 Gm45167-201ENSMUST00000208007 322 ntBASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha3Q91Y16 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms