Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Gm27741-201ENSMUST00000185060 237 ntBASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Gm6089-201ENSMUST00000197666 938 ntBASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha8Q91Y12 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha8Q91Y12 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.04
Pcdha8Q91Y12 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha8Q91Y12 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha8Q91Y12 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha8Q91Y12 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Pcdha8Q91Y12 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha8Q91Y12 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha8Q91Y12 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha8Q91Y12 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha8Q91Y12 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha8Q91Y12 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha8Q91Y12 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha8Q91Y12 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Pcdha8Q91Y12 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Pcdha8Q91Y12 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha8Q91Y12 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.77□□□□□ -0.04
Pcdha8Q91Y12 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha8Q91Y12 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.77□□□□□ -0.05
Pcdha8Q91Y12 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdha8Q91Y12 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha8Q91Y12 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Pcdha8Q91Y12 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdha8Q91Y12 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdha8Q91Y12 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha8Q91Y12 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.77□□□□□ -0.05
Pcdha8Q91Y12 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha8Q91Y12 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha8Q91Y12 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha8Q91Y12 Grk6-207ENSMUST00000225925 2769 ntBASIC14.77□□□□□ -0.05
Pcdha8Q91Y12 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pcdha8Q91Y12 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha8Q91Y12 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha8Q91Y12 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha8Q91Y12 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Mir8098-201ENSMUST00000184011 137 ntBASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdha8Q91Y12 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha8Q91Y12 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha8Q91Y12 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha8Q91Y12 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdha8Q91Y12 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms