Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Gm37153-201ENSMUST00000193637 231 ntBASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Ddx1Q91VR5 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Gm10499-201ENSMUST00000174094 934 ntBASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx1Q91VR5 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Celf4-206ENSMUST00000224553 1729 ntBASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.61■□□□□ 0.09
Ddx1Q91VR5 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Gm9682-201ENSMUST00000197505 556 ntBASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ddx1Q91VR5 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx1Q91VR5 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms