Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Gm25016-201ENSMUST00000158399 131 ntBASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdh18Q8VHR0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh18Q8VHR0 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.64□□□□□ -0.07
Pcdh18Q8VHR0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms