Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Gm25406-201ENSMUST00000157599 105 ntBASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Gm21559-201ENSMUST00000220638 855 ntBASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Gm8587-201ENSMUST00000076538 843 ntBASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab40cQ8VHQ4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms