Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.61■□□□□ 0.25
Rpap2Q8VC34 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Psmb5-202ENSMUST00000227257 622 ntBASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.61■□□□□ 0.25
Rpap2Q8VC34 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpap2Q8VC34 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.59■□□□□ 0.25
Rpap2Q8VC34 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Gm14140-201ENSMUST00000119999 995 ntBASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.59■□□□□ 0.25
Rpap2Q8VC34 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.59■□□□□ 0.25
Rpap2Q8VC34 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpap2Q8VC34 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rpap2Q8VC34 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rpap2Q8VC34 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rpap2Q8VC34 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rpap2Q8VC34 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Rpap2Q8VC34 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpap2Q8VC34 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Rpap2Q8VC34 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpap2Q8VC34 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Rpap2Q8VC34 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.58■□□□□ 0.24
Rpap2Q8VC34 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.58■□□□□ 0.24
Rpap2Q8VC34 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms