Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps39Q8R5L3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Gm4535-201ENSMUST00000182274 558 ntBASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Gm10355-201ENSMUST00000097146 517 ntBASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.18■□□□□ 0.02
Vps39Q8R5L3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Gm6296-201ENSMUST00000222599 943 ntBASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps39Q8R5L3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Gm27646-201ENSMUST00000183989 110 ntBASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms