Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Gm27989-201ENSMUST00000184721 107 ntBASIC17.41■□□□□ 0.38
Usp33Q8R5K2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Gm2423-201ENSMUST00000074863 733 ntBASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Usp33Q8R5K2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.4■□□□□ 0.38
Usp33Q8R5K2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Gm9824-201ENSMUST00000178707 561 ntBASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Gm38225-201ENSMUST00000194001 393 ntBASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.4■□□□□ 0.38
Usp33Q8R5K2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp33Q8R5K2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp33Q8R5K2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp33Q8R5K2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Usp33Q8R5K2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Gm15693-201ENSMUST00000120470 637 ntBASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Usp33Q8R5K2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp33Q8R5K2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp33Q8R5K2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.38■□□□□ 0.37
Usp33Q8R5K2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp33Q8R5K2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.38■□□□□ 0.37
Usp33Q8R5K2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp33Q8R5K2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp33Q8R5K2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp33Q8R5K2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp33Q8R5K2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Usp33Q8R5K2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp33Q8R5K2 Gm2810-201ENSMUST00000118681 990 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms