Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Gm15590-201ENSMUST00000078419 552 ntBASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Top1mtQ8R4U6 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Top1mtQ8R4U6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Mir5126-201ENSMUST00000175513 77 ntBASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Gm27741-201ENSMUST00000185060 237 ntBASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Top1mtQ8R4U6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Top1mtQ8R4U6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Top1mtQ8R4U6 Efs-202ENSMUST00000227037 2540 ntBASIC18.08■□□□□ 0.49
Top1mtQ8R4U6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
Top1mtQ8R4U6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Top1mtQ8R4U6 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Top1mtQ8R4U6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.08■□□□□ 0.48
Top1mtQ8R4U6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Top1mtQ8R4U6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Top1mtQ8R4U6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.08■□□□□ 0.48
Top1mtQ8R4U6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Top1mtQ8R4U6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Top1mtQ8R4U6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Top1mtQ8R4U6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.08■□□□□ 0.48
Top1mtQ8R4U6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Top1mtQ8R4U6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Top1mtQ8R4U6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Top1mtQ8R4U6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Top1mtQ8R4U6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Top1mtQ8R4U6 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Top1mtQ8R4U6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.07■□□□□ 0.48
Top1mtQ8R4U6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Top1mtQ8R4U6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.07■□□□□ 0.48
Top1mtQ8R4U6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Top1mtQ8R4U6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Top1mtQ8R4U6 Gm27628-201ENSMUST00000184911 107 ntBASIC18.07■□□□□ 0.48
Top1mtQ8R4U6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms