Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ushbp1Q8R370 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ushbp1Q8R370 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ushbp1Q8R370 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.97■□□□□ 0.31
Ushbp1Q8R370 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ushbp1Q8R370 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ushbp1Q8R370 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ushbp1Q8R370 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ushbp1Q8R370 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ushbp1Q8R370 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ushbp1Q8R370 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ushbp1Q8R370 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ushbp1Q8R370 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ushbp1Q8R370 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ushbp1Q8R370 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ushbp1Q8R370 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ushbp1Q8R370 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ushbp1Q8R370 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Ushbp1Q8R370 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Ushbp1Q8R370 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Ushbp1Q8R370 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Ushbp1Q8R370 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ushbp1Q8R370 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ushbp1Q8R370 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ushbp1Q8R370 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.96■□□□□ 0.3
Ushbp1Q8R370 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.95■□□□□ 0.3
Ushbp1Q8R370 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.95■□□□□ 0.3
Ushbp1Q8R370 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ushbp1Q8R370 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms