Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Zcchc9Q8R1J3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Gm13365-201ENSMUST00000121188 973 ntBASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Gm11745-201ENSMUST00000121669 448 ntBASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Gm44335-201ENSMUST00000196879 141 ntBASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Gm44297-201ENSMUST00000198304 141 ntBASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Gm44346-201ENSMUST00000198851 141 ntBASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zcchc9Q8R1J3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Gm18246-201ENSMUST00000221023 728 ntBASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms